- GeneNetworkAPI.jl
Julia package for interfacing with the GeneNetwork web service
- LiteQTL.jl
Julia package for whole genome eQTL scans near real-time with a GPU option
- FlxQTL.jl
Julia package for multivariate linear mixed model genome scans
- matrix linear models
Jane Liang has written three interconnected packages for implementing matrix linear models in Julia
- FaSTLMM.jl
Julia package for Factored Spectrally Transformed Linear Mixed Models used for association mapping in genetically structured populations
- R/qtlCurve
R package for genetic analysis of function-valued phenotypes.
- R/qtlDesign
R package for the design of QTL experiments.
- Matlab/pseudomarker
Matlab package for analysis of QTL experiments.
- github
Github is a software code repository and network. It supports code versioned using Git. See my public repositories
- R/qtl
R package for the analysis of QTL experiments by Karl Broman.